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#5 How to use Bayes in the biomedical industry, with Eric Ma

#5 How to use Bayes in the biomedical industry, with Eric Ma

FromLearning Bayesian Statistics


#5 How to use Bayes in the biomedical industry, with Eric Ma

FromLearning Bayesian Statistics

ratings:
Length:
47 minutes
Released:
Dec 17, 2019
Format:
Podcast episode

Description

I have two questions for you: Are you a self-learner? Then how do you stay up to date? What should you focus on if you’re a beginner, or if you’re more advanced?
And here is my second question: Are you working in biomedicine? And if you do, are you using Bayesian tools? Then how do you get your co-workers more used to posterior distributions than p-values? In other words, how do you change behaviors in a large organization?
In this episode, Eric Ma will answer all these questions and even tell us his favorite modeling techniques, which problems he encountered with these models, and how he solved them. He’ll also share with us the software-engineering workflow he uses at Novartis to share his work with colleagues.
Eric is a data scientist at the Novartis Institutes for Biomedical Research, where he focuses on Bayesian statistical methods to make medicines for patients. Eric is also a prolific open source developer: he led the development of pyjanitor, an API for cleaning data in Python, and nxviz, a visualization package for NetworkX. He also contributes to PyMC3, matplotlib and bokeh.
This is « Learning Bayesian Statistics », episode 5, recorded October 21, 2019.
Our theme music is « Good Bayesian », by Baba Brinkman (feat MC Lars and Mega Ran). Check out his awesome work at https://bababrinkman.com/ (https://bababrinkman.com/) !
Links from the show:
Eric's website: https://ericmjl.github.io/ (https://ericmjl.github.io/)
Eric on Twitter: https://twitter.com/ericmjl (https://twitter.com/ericmjl)
Bayesian analysis recipes: https://github.com/ericmjl/bayesian-analysis-recipes (https://github.com/ericmjl/bayesian-analysis-recipes)
Bayesian deep learning demystified: https://github.com/ericmjl/bayesian-deep-learning-demystified
Causality repo: https://github.com/ericmjl/causality (https://github.com/ericmjl/causality)
Pyjanitor - Convenient data cleaning routines for repetitive tasks: https://pyjanitor.readthedocs.io/ (https://pyjanitor.readthedocs.io/)
PyMC3 - Probabilistic Programming in Python: https://docs.pymc.io/ (https://docs.pymc.io/)
Panel - A high-level app and dashboarding solution for Python: https://panel.pyviz.org/ (https://panel.pyviz.org/)
Nxviz - Visualization Package for NetworkX: https://nxviz.readthedocs.io/en/latest/ (https://nxviz.readthedocs.io/en/latest/)



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Released:
Dec 17, 2019
Format:
Podcast episode

Titles in the series (100)

Are you a researcher or data scientist / analyst / ninja? Do you want to learn Bayesian inference, stay up to date or simply want to understand what Bayesian inference is? Then this podcast is for you! You'll hear from researchers and practitioners of all fields about how they use Bayesian statistics, and how in turn YOU can apply these methods in your modeling workflow. When I started learning Bayesian methods, I really wished there were a podcast out there that could introduce me to the methods, the projects and the people who make all that possible. So I created "Learning Bayesian Statistics", where you'll get to hear how Bayesian statistics are used to detect black matter in outer space, forecast elections or understand how diseases spread and can ultimately be stopped. But this show is not only about successes -- it's also about failures, because that's how we learn best. So you'll often hear the guests talking about what *didn't* work in their projects, why, and how they overcame these challenges. Because, in the end, we're all lifelong learners! My name is Alex Andorra by the way, and I live in Paris. By day, I'm a data scientist and modeler at the https://www.pymc-labs.io/ (PyMC Labs) consultancy. By night, I don't (yet) fight crime, but I'm an open-source enthusiast and core contributor to the python packages https://docs.pymc.io/ (PyMC) and https://arviz-devs.github.io/arviz/ (ArviZ). I also love https://www.pollsposition.com/ (election forecasting) and, most importantly, Nutella. But I don't like talking about it – I prefer eating it. So, whether you want to learn Bayesian statistics or hear about the latest libraries, books and applications, this podcast is for you -- just subscribe! You can also support the show and https://www.patreon.com/learnbayesstats (unlock exclusive Bayesian swag on Patreon)! This podcast uses the following third-party services for analysis: Podcorn - https://podcorn.com/privacy